MGYG000308433

Taxonomy

Anaerotignum lactatifermentans Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Anaerotignaceae > Anaerotignum > Anaerotignum lactatifermentans

Cluster representative

MGYG000312529

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000312529 on MGnify
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Annotations

MGYG000308433’s cluster representative genome MGYG000312529 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000312529 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308433 Copy API Endpoint

MGYG000308433’s cluster representative (MGYG000312529) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000312529’s sequence. Because MGYG000308433 has been clustered with MGYG000312529 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308433.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000312529

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10455491	SAMEA112905383	Probiotic
1.00	SAMEA9449928	SAMEA112904898	Prebiotic
1.00	SAMEA9449849	SAMEA112904926	Probiotic
1.00	SAMEA7025240	SAMEA112904911	Probiotic
1.00	SAMEA10145601	SAMEA112905257	Control
1.00	SAMEA9449863	SAMEA112905353	Prebiotic
1.00	SAMEA10105037	SAMEA112904745	Probiotic
1.00	SAMEA9449926	SAMEA112904943	Prebiotic
1.00	SAMEA7025274	SAMEA112905263	Probiotic
0.99	SAMEA7025244	SAMEA112904870	Probiotic