HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

SAMEA112904870: a HoloFood chicken host

Data available for SAMEA112904870


Animal details
System
chicken
Samples
G Has metagenomic data
Has metagenomic data
Has host genomic data Has host genomic data
View 2 derived samples
API endpoint
/api/animals/SAMEA112904870 Copy API Endpoint
Animal metadata

Metadata for sample SAMEA112904870, stored in BioSamples.

 Download all as TSV

Pen metadata

Marker Measurement Units
Average Daily Feed intake: Day 00 - 07 19.4 g
Average Daily Feed intake: Day 00 - 35 94.24 g
Average Daily Feed intake: Day 07 - 21 64.7 g
Average Daily Feed intake: Day 21 - 35 167.07 g
Average Daily Gain: Day 00 - 07 18.84 g
Average Daily Gain: Day 00 - 35 58.43 g
Average Daily Gain: Day 07 - 21 49.69 g
Average Daily Gain: Day 21 - 35 86.97 g
Average European Performance Efficiency Factor: Day 00 - 07 173.83 None
Average Feed to Conversion Ratio (not corrected): Day 07 - 21 1.302 None
Average Feed to Conversion Ratio: Day 07 - 21 1.302 g/g
Average Mortality without culleds: Day 07 - 21 0 %
Average body weight at day 00 39.81 g
Average body weight at day 07 171.71 g
Average body weight at day 21 867.38 g
Average body weight at day 35 2085 g
European Performance Efficiency Factor: Day 00 - 35 344.21 None
European Performance Efficiency Factor: Day 07 - 21 381.61 None
European Performance Efficiency Factor: Day 21 - 35 452.76 None
FCR (not corrected): Day 00 - 07 1.066 None
Feed to Conversion Ratio (not corrected): Day 00 - 35 1.617 None
Feed to Conversion Ratio (not corrected): Day 21 - 35 1.921 None
Feed to Conversion Ratio: Day 00 - 07 1.03 g/g
Feed to Conversion Ratio: Day 00 - 35 1.613 g/g
Feed to Conversion Ratio: Day 21 - 35 1.921 g/g
Foot Pad Dermatitis (FPD Punctuation) at Day 07 P0=100.00 P1=0.00 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 21 P0=83.87 P1=16.13 P2=0.00 P3=0.00 P4=0.00 %
Foot Pad Dermatitis (FPD Punctuation) at Day 35 P0=83.33 P1=12.50 P2=4.17 P3=0.00 P4=0.00 %
Litter at Day 07 6.59 pH
Litter at Day 21 7.09 pH
Litter at Day 35 7.55 pH
Mean Abdominal fat Yield 1.04 %
Mean Abdominal fat weight 22.52 g
Mean Breast Yield 17.34 %
Mean Breast weight 371.42 g
Mean CRP at Day 07 1.0536 pg/mg
Mean CRP at Day 21 1.0536 pg/mg
Mean CRP at Day 35 1.0536 pg/mg
Mean Carcass Weight 1609.5 g
Mean Carcass Yield 75.9 %
Mean HPT at Day 07 0.96841 ng/ml
Mean HPT at Day 21 0.64603 ng/ml
Mean HPT at Day 35 0.59161 ng/ml
Mean LPS at Day 07 3.5416 ng/L
Mean LPS at Day 21 4.083 ng/L
Mean LPS at Day 35 3.2369 ng/L
Mean Legs Yield 20.93 %
Mean Legs weight 443.87 g
Mean TBARS 0.0533 mg MDA/kg
Mean carcass body weight 2117.5 g
Mean feather cortisol at Day 07 14.667 pg/mg
Mean feather cortisol at Day 21 10.882 pg/mg
Mean feather cortisol at Day 35 16.207 pg/mg
Mortality without culleds: Day 00 - 07 0 %
Mortality without culleds: Day 00 - 35 0 %
Mortality without culleds: Day 21 - 35 0 %
Mortality: Day 00 - 07 5 %
Mortality: Day 00 - 35 5 %
Mortality: Day 07 - 21 0 %
Mortality: Day 21 - 35 0 %
Pen code CA17 None

Sample metadata

Marker Measurement Units
Animal code CA17.02 None
Breed Ross None
C-Reactive protein 0.34 pg/ml
Chicken body weight 192.2 g
Feather cortisol 14.24 pg/mg
Haptoglobin 264.88 ng/ml
Lipopolysaccharide 12.46 ng/l
Organism Chicken None
Project HoloFood None
Sampling time Day 7 None
Sex Male None

Treatment metadata

Marker Measurement Units
Treatment code CO None
Treatment name Probiotic None

Trial metadata

Marker Measurement Units
Trial code CA None
Trial description Trial 1 None
Trial end 2019-03-11 None
Trial start 2019-02-04 None