MGYG000308400

Taxonomy

Enorma massiliensis Bacteria > Actinobacteriota > Coriobacteriia > Coriobacteriales > Coriobacteriaceae > Enorma > Enorma massiliensis

Cluster representative

MGYG000313705

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000313705 on MGnify
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Annotations

MGYG000308400’s cluster representative genome MGYG000313705 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000313705 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308400 Copy API Endpoint

MGYG000308400’s cluster representative (MGYG000313705) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000313705’s sequence. Because MGYG000308400 has been clustered with MGYG000313705 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308400.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000313705

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7571843	SAMEA112904832	Prebiotic
1.00	SAMEA9449947	SAMEA112905276	Prebiotic
1.00	SAMEA7697620	SAMEA112904920	Prebiotic
0.99	SAMEA7697618	SAMEA112904881	Prebiotic
0.99	SAMEA14409936	SAMEA112904743	Control
0.99	SAMEA7571848	SAMEA112905284	Prebiotic
0.99	SAMEA7697628	SAMEA112905283	Control
0.99	SAMEA7025281	SAMEA112904979	Probiotic
0.99	SAMEA9449943	SAMEA112904954	Control
0.99	SAMEA7571845	SAMEA112904735	Control