HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916457.8030-NODE-8030-length-10733-cov-35.335456|viral_sequence ERZ2916457.8030-NODE-8030-length-10733-cov-35.335456 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916457.8049-NODE-8049-length-10706-cov-14.245611|viral_sequence ERZ2916457.8049-NODE-8049-length-10706-cov-14.245611 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.816-NODE-816-length-51047-cov-25.762355|viral_sequence ERZ2916457.816-NODE-816-length-51047-cov-25.762355 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916457.8280-NODE-8280-length-10441-cov-8.807144|viral_sequence ERZ2916457.8280-NODE-8280-length-10441-cov-8.807144 viral_sequence View contig
Cluster representative of 3 other viral fragments. View cluster
ERZ2916457.8328-NODE-8328-length-10392-cov-9.716165|viral_sequence ERZ2916457.8328-NODE-8328-length-10392-cov-9.716165 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916457.837-NODE-837-length-50298-cov-11.094123|viral_sequence ERZ2916457.837-NODE-837-length-50298-cov-11.094123 viral_sequence Sepvirinae View contig
Cluster representative of 11 other viral fragments. View cluster
ERZ2916457.8491-NODE-8491-length-10220-cov-7.650959|viral_sequence ERZ2916457.8491-NODE-8491-length-10220-cov-7.650959 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916457.86-NODE-86-length-136880-cov-24.876740|prophage-4300:64377 ERZ2916457.86-NODE-86-length-136880-cov-24.876740 prophage View contig
Cluster representative of 32 other viral fragments. View cluster
ERZ2916457.86-NODE-86-length-136880-cov-24.876740|prophage-71392:136818 ERZ2916457.86-NODE-86-length-136880-cov-24.876740 prophage Viewing
Cluster representative of 11 other viral fragments. View cluster
ERZ2916457.8738-NODE-8738-length-9984-cov-7.265989|viral_sequence ERZ2916457.8738-NODE-8738-length-9984-cov-7.265989 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue