HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916414.1860-NODE-1860-length-24412-cov-7.488237|viral_sequence ERZ2916414.1860-NODE-1860-length-24412-cov-7.488237 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 5 other viral fragments. View cluster
ERZ2916414.18776-NODE-18776-length-2366-cov-4.003462|viral_sequence ERZ2916414.18776-NODE-18776-length-2366-cov-4.003462 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916414.1898-NODE-1898-length-24042-cov-212.430900|viral_sequence ERZ2916414.1898-NODE-1898-length-24042-cov-212.430900 viral_sequence View contig
Cluster representative of 13 other viral fragments. View cluster
ERZ2916414.21132-NODE-21132-length-2122-cov-2.795839|viral_sequence ERZ2916414.21132-NODE-21132-length-2122-cov-2.795839 viral_sequence Viewing
Cluster representative of 0 other viral fragments. View cluster
ERZ2916414.2163-NODE-2163-length-21456-cov-7.467548|viral_sequence ERZ2916414.2163-NODE-2163-length-21456-cov-7.467548 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916414.2194-NODE-2194-length-21196-cov-6.321319|viral_sequence ERZ2916414.2194-NODE-2194-length-21196-cov-6.321319 viral_sequence View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2916414.232-NODE-232-length-90861-cov-230.331553|prophage-271:34781 ERZ2916414.232-NODE-232-length-90861-cov-230.331553 prophage View contig
Cluster representative of 20 other viral fragments. View cluster
ERZ2916414.2332-NODE-2332-length-20072-cov-7.209972|viral_sequence ERZ2916414.2332-NODE-2332-length-20072-cov-7.209972 viral_sequence Brockvirinae View contig
Cluster representative of 70 other viral fragments. View cluster
ERZ2916414.2365-NODE-2365-length-19848-cov-5.913656|viral_sequence ERZ2916414.2365-NODE-2365-length-19848-cov-5.913656 viral_sequence Bastillevirinae View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916414.23776-NODE-23776-length-1898-cov-7.173630|viral_sequence ERZ2916414.23776-NODE-23776-length-1898-cov-7.173630 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue