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Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

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Viral sequence ID Parent contig Type Taxonomy View
ERZ2641778.18443-NODE-18443-length-3450-cov-5.199705|viral_sequence ERZ2641778.18443-NODE-18443-length-3450-cov-5.199705 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641778.1872-NODE-1872-length-31458-cov-37.948285|viral_sequence ERZ2641778.1872-NODE-1872-length-31458-cov-37.948285 viral_sequence Vequintavirinae View contig
Cluster representative of 9 other viral fragments. View cluster
ERZ2641778.18766-NODE-18766-length-3383-cov-33.015625|viral_sequence ERZ2641778.18766-NODE-18766-length-3383-cov-33.015625 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641778.20000-NODE-20000-length-3147-cov-5.374838|viral_sequence ERZ2641778.20000-NODE-20000-length-3147-cov-5.374838 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641778.203-NODE-203-length-101117-cov-14.904979|prophage-38621:78479 ERZ2641778.203-NODE-203-length-101117-cov-14.904979 prophage View contig
Cluster representative of 26 other viral fragments. View cluster
ERZ2641778.20550-NODE-20550-length-3055-cov-4.780333|viral_sequence ERZ2641778.20550-NODE-20550-length-3055-cov-4.780333 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641778.20845-NODE-20845-length-3007-cov-5.353320|viral_sequence ERZ2641778.20845-NODE-20845-length-3007-cov-5.353320 viral_sequence View contig
Cluster representative of 6 other viral fragments. View cluster
ERZ2641778.2130-NODE-2130-length-28835-cov-279.614489|prophage-5543:28835 ERZ2641778.2130-NODE-2130-length-28835-cov-279.614489 prophage View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2641778.21915-NODE-21915-length-2848-cov-14.366273|viral_sequence ERZ2641778.21915-NODE-21915-length-2848-cov-14.366273 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641778.221-NODE-221-length-96996-cov-70.036414|prophage-27662:96996 ERZ2641778.221-NODE-221-length-96996-cov-70.036414 prophage View contig
Cluster representative of 1 other viral fragment. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue