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Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

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Viral sequence ID Parent contig Type Taxonomy View
ERZ2641725.16236-NODE-16236-length-4426-cov-4.362388|viral_sequence ERZ2641725.16236-NODE-16236-length-4426-cov-4.362388 viral_sequence Spounavirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641725.1635-NODE-1635-length-27425-cov-59.560906|viral_sequence ERZ2641725.1635-NODE-1635-length-27425-cov-59.560906 viral_sequence Guernseyvirinae View contig
Cluster representative of 3 other viral fragments. View cluster
ERZ2641725.1665-NODE-1665-length-27116-cov-13.937438|prophage-1:23916 ERZ2641725.1665-NODE-1665-length-27116-cov-13.937438 prophage View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641725.16671-NODE-16671-length-4338-cov-5.315200|viral_sequence ERZ2641725.16671-NODE-16671-length-4338-cov-5.315200 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641725.17-NODE-17-length-264537-cov-16.068334|prophage-163681:264537 ERZ2641725.17-NODE-17-length-264537-cov-16.068334 prophage View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2641725.17-NODE-17-length-264537-cov-16.068334|prophage-49959:152003 ERZ2641725.17-NODE-17-length-264537-cov-16.068334 prophage View contig
Cluster representative of 10 other viral fragments. View cluster
ERZ2641725.17094-NODE-17094-length-4249-cov-15.771340|viral_sequence ERZ2641725.17094-NODE-17094-length-4249-cov-15.771340 viral_sequence View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2641725.172-NODE-172-length-114440-cov-32.955361|prophage-8:35587 ERZ2641725.172-NODE-172-length-114440-cov-32.955361 prophage View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2641725.17364-NODE-17364-length-4200-cov-9.668999|viral_sequence ERZ2641725.17364-NODE-17364-length-4200-cov-9.668999 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2641725.17919-NODE-17919-length-4101-cov-8.434998|viral_sequence ERZ2641725.17919-NODE-17919-length-4101-cov-8.434998 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue