MGYG000320879

Taxonomy

Parabacteroides distasonis Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Tannerellaceae > Parabacteroides > Parabacteroides distasonis

Cluster representative

MGYG000317041

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317041 on MGnify
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Annotations

MGYG000320879’s cluster representative genome MGYG000317041 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317041 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320879 Copy API Endpoint

MGYG000320879’s cluster representative (MGYG000317041) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317041’s sequence. Because MGYG000320879 has been clustered with MGYG000317041 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320879.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317041

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10145556	SAMEA112904772	Control
1.00	SAMEA7697583	SAMEA112904905	Probiotic
1.00	SAMEA7025236	SAMEA112905113	Probiotic
1.00	SAMEA10145564	SAMEA112905104	Control
1.00	SAMEA7025241	SAMEA112905244	Probiotic
1.00	SAMEA7697581	SAMEA112905343	Probiotic
1.00	SAMEA10145568	SAMEA112905220	Control
1.00	SAMEA14099421	SAMEA112905128	Control
1.00	SAMEA9449841	SAMEA112904936	Probiotic
1.00	SAMEA10159245	SAMEA112905091	Prebiotic