MGYG000320261

Taxonomy

Agathobaculum sp900557315 Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Butyricicoccaceae > Agathobaculum > Agathobaculum sp900557315

Cluster representative

MGYG000318820

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000318820 on MGnify
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Annotations

MGYG000320261’s cluster representative genome MGYG000318820 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000318820 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000320261 Copy API Endpoint

MGYG000320261’s cluster representative (MGYG000318820) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000318820’s sequence. Because MGYG000320261 has been clustered with MGYG000318820 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000320261.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000318820

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7697588	SAMEA112905360	Probiotic
0.99	SAMEA9449952	SAMEA112905334	Probiotic
0.99	SAMEA9449896	SAMEA112905007	Prebiotic
0.99	SAMEA10104926	SAMEA112905372	Prebiotic
0.98	SAMEA7025261	SAMEA112905342	Probiotic
0.95	SAMEA10104961	SAMEA112904891	Probiotic
0.95	SAMEA7697595	SAMEA112905025	Prebiotic
0.94	SAMEA9449835	SAMEA112904998	Probiotic
0.94	SAMEA10104943	SAMEA112905270	Probiotic
0.93	SAMEA9449898	SAMEA112905265	Prebiotic