HoloFood Data Portal

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MGYG000317116

Details for MGYG000317116, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Butyricicoccus sp900604335 Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Butyricicoccaceae > Butyricicoccus > Butyricicoccus sp900604335
Cluster representative

MGYG000316758

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316758 on MGnify
 Show other genomes in cluster
Annotations

MGYG000317116’s cluster representative genome MGYG000316758 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316758 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000317116 Copy API Endpoint
Samples containing this genome

MGYG000317116’s cluster representative (MGYG000316758) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316758’s sequence. Because MGYG000317116 has been clustered with MGYG000316758 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000317116.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316758

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Containment Sample accession Animal accession Treatment
0.73 SAMEA7697588 Probiotic
0.73 SAMEA7697609 Probiotic
0.72 SAMEA14099421 Control
0.72 SAMEA10104916 Prebiotic
0.72 SAMEA10104928 Prebiotic
0.71 SAMEA7025277 Control
0.70 SAMEA9449950 Prebiotic
0.70 SAMEA7025240 Probiotic
0.69 SAMEA14099424 Prebiotic
0.69 SAMEA7697626 Probiotic