MGYG000316201

Taxonomy

Faeciplasma gallinarum Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Ruminococcaceae > Faeciplasma > Faeciplasma gallinarum

Cluster representative

MGYG000320790

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000320790 on MGnify
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Annotations

MGYG000316201’s cluster representative genome MGYG000320790 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000320790 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000316201 Copy API Endpoint

MGYG000316201’s cluster representative (MGYG000320790) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000320790’s sequence. Because MGYG000316201 has been clustered with MGYG000320790 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000316201.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000320790

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025239	SAMEA112905167	Probiotic
1.00	SAMEA7025242	SAMEA112905292	Control
1.00	SAMEA7025236	SAMEA112905113	Probiotic
1.00	SAMEA10455483	SAMEA112905075	Prebiotic
1.00	SAMEA7697586	SAMEA112904836	Prebiotic
1.00	SAMEA7571801	SAMEA112904766	Probiotic
1.00	SAMEA7722476	SAMEA112904871	Control
1.00	SAMEA10104929	SAMEA112905175	Prebiotic
1.00	SAMEA7722479	SAMEA112905115	Prebiotic
1.00	SAMEA10104961	SAMEA112904891	Probiotic