MGYG000314538

Taxonomy

Butyricicoccus avicola Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Butyricicoccaceae > Butyricicoccus > Butyricicoccus avicola

Cluster representative

MGYG000320013

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000320013 on MGnify
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Annotations

MGYG000314538’s cluster representative genome MGYG000320013 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000320013 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000314538 Copy API Endpoint

MGYG000314538’s cluster representative (MGYG000320013) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000320013’s sequence. Because MGYG000314538 has been clustered with MGYG000320013 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000314538.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000320013

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Containment	Sample accession	Animal accession	Treatment
0.98	SAMEA10105037	SAMEA112904745	Probiotic
0.98	SAMEA10104941	SAMEA112904809	Probiotic
0.98	SAMEA7025260	SAMEA112905317	Prebiotic
0.97	SAMEA7571800	SAMEA112904785	Probiotic
0.97	SAMEA10105009	SAMEA112905057	Prebiotic
0.97	SAMEA9449894	SAMEA112905203	Probiotic
0.97	SAMEA7571807	SAMEA112905097	Probiotic
0.97	SAMEA9449947	SAMEA112905276	Prebiotic
0.97	SAMEA10104997	SAMEA112905023	Prebiotic
0.97	SAMEA9449862	SAMEA112905277	Prebiotic