MGYG000313628

Taxonomy

Ventrenecus stercoripullorum Bacteria > Firmicutes > Bacilli > RF39 > UBA660 > Ventrenecus > Ventrenecus stercoripullorum

Cluster representative

MGYG000316637

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316637 on MGnify
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Annotations

MGYG000313628’s cluster representative genome MGYG000316637 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316637 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000313628 Copy API Endpoint

MGYG000313628’s cluster representative (MGYG000316637) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316637’s sequence. Because MGYG000313628 has been clustered with MGYG000316637 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000313628.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316637

 Download all as TSV

Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA14099424	SAMEA112905085	Prebiotic
1.00	SAMEA7571814	SAMEA112904917	Prebiotic
1.00	SAMEA7025282	SAMEA112905191	Control
1.00	SAMEA10159244	SAMEA112905364	Probiotic
0.98	SAMEA9449956	SAMEA112904759	Probiotic
0.97	SAMEA9449896	SAMEA112905007	Prebiotic
0.94	SAMEA10105009	SAMEA112905057	Prebiotic
0.93	SAMEA7697581	SAMEA112905343	Probiotic
0.93	SAMEA9449932	SAMEA112905251	Prebiotic
0.93	SAMEA7697623	SAMEA112905102	Probiotic