MGYG000313365

Taxonomy

Borkfalkia sp904373255 Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Borkfalkia > Borkfalkia sp904373255

Cluster representative

MGYG000316491

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316491 on MGnify
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Annotations

MGYG000313365’s cluster representative genome MGYG000316491 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316491 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000313365 Copy API Endpoint

MGYG000313365’s cluster representative (MGYG000316491) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316491’s sequence. Because MGYG000313365 has been clustered with MGYG000316491 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000313365.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316491

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Containment	Sample accession	Animal accession	Treatment
0.99	SAMEA10145556	SAMEA112904772	Control
0.99	SAMEA10104910	SAMEA112904813	Probiotic
0.99	SAMEA7025236	SAMEA112905113	Probiotic
0.99	SAMEA14099421	SAMEA112905128	Control
0.99	SAMEA7571782	SAMEA112904984	Prebiotic
0.99	SAMEA7025266	SAMEA112905005	Probiotic
0.99	SAMEA9449839	SAMEA112905373	Control
0.99	SAMEA7025252	SAMEA112905079	Prebiotic
0.99	SAMEA7571862	SAMEA112904989	Probiotic
0.99	SAMEA7025248	SAMEA112905319	Probiotic