HoloFood Data Portal

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MGYG000313119

Details for MGYG000313119, a genome assembled from HoloFood chicken metagenomes


Genome details
Taxonomy
Heritagella sp905215105 Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Acutalibacteraceae > Heritagella > Heritagella sp905215105
Cluster representative

MGYG000317148

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317148 on MGnify
 Show other genomes in cluster
Annotations

MGYG000313119’s cluster representative genome MGYG000317148 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317148 from each CAZy category.

API endpoint
/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000313119 Copy API Endpoint
Samples containing this genome

MGYG000313119’s cluster representative (MGYG000317148) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317148’s sequence. Because MGYG000313119 has been clustered with MGYG000317148 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000313119.

Filter containing samples

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317148

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Containment Sample accession Animal accession Treatment
0.77 SAMEA7571845 Control
0.77 SAMEA7697598 Control
0.76 SAMEA10105014 Probiotic
0.76 SAMEA9449833 Probiotic
0.76 SAMEA7025281 Probiotic
0.76 SAMEA10105005 Probiotic
0.75 SAMEA7025252 Prebiotic
0.75 SAMEA7697588 Probiotic
0.74 SAMEA10105009 Prebiotic
0.74 SAMEA10454438 Probiotic