MGYG000312772

Taxonomy

Enterococcus_B hirae Bacteria > Firmicutes > Bacilli > Lactobacillales > Enterococcaceae > Enterococcus_B > Enterococcus_B hirae

Cluster representative

MGYG000312535

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000312535 on MGnify
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Annotations

MGYG000312772’s cluster representative genome MGYG000312535 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000312535 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000312772 Copy API Endpoint

MGYG000312772’s cluster representative (MGYG000312535) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000312535’s sequence. Because MGYG000312772 has been clustered with MGYG000312535 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000312772.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000312535

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10130085	SAMEA112905130	Prebiotic
0.99	SAMEA10130065	SAMEA112904967	Prebiotic
0.99	SAMEA10130122	SAMEA112905103	Prebiotic
0.99	SAMEA10130105	SAMEA112904897	Probiotic
0.99	SAMEA10158033	SAMEA112905179	Prebiotic
0.99	SAMEA7571847	SAMEA112905358	Prebiotic
0.98	SAMEA9449945	SAMEA112904907	Prebiotic
0.98	SAMEA9449948	SAMEA112905355	Prebiotic
0.98	SAMEA7571822	SAMEA112904992	Probiotic
0.97	SAMEA7697594	SAMEA112904978	Probiotic