MGYG000308731

Taxonomy

Faecivivens stercoripullorum Bacteria > Firmicutes_A > Clostridia > Oscillospirales > Ruminococcaceae > Faecivivens > Faecivivens stercoripullorum

Cluster representative

MGYG000317986

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317986 on MGnify
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Annotations

MGYG000308731’s cluster representative genome MGYG000317986 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317986 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308731 Copy API Endpoint

MGYG000308731’s cluster representative (MGYG000317986) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317986’s sequence. Because MGYG000308731 has been clustered with MGYG000317986 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308731.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317986

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7697595	SAMEA112905025	Prebiotic
0.99	SAMEA7571779	SAMEA112905087	Prebiotic
0.99	SAMEA7025240	SAMEA112904911	Probiotic
0.99	SAMEA9449894	SAMEA112905203	Probiotic
0.99	SAMEA7025252	SAMEA112905079	Prebiotic
0.99	SAMEA7025253	SAMEA112905350	Prebiotic
0.99	SAMEA7571808	SAMEA112905029	Control
0.99	SAMEA7697592	SAMEA112904737	Control
0.99	SAMEA7697599	SAMEA112904961	Control
0.99	SAMEA7697576	SAMEA112904922	Prebiotic