MGYG000308577

Taxonomy

Borkfalkia sp904373255 Bacteria > Firmicutes_A > Clostridia > Christensenellales > Borkfalkiaceae > Borkfalkia > Borkfalkia sp904373255

Cluster representative

MGYG000316491

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000316491 on MGnify
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Annotations

MGYG000308577’s cluster representative genome MGYG000316491 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000316491 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308577 Copy API Endpoint

MGYG000308577’s cluster representative (MGYG000316491) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000316491’s sequence. Because MGYG000308577 has been clustered with MGYG000316491 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308577.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000316491

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Containment	Sample accession	Animal accession	Treatment
0.99	SAMEA7571779	SAMEA112905087	Prebiotic
0.99	SAMEA10145589	SAMEA112904854	Control
0.99	SAMEA10105037	SAMEA112904745	Probiotic
0.98	SAMEA7571827	SAMEA112905382	Probiotic
0.98	SAMEA7697583	SAMEA112904905	Probiotic
0.98	SAMEA9449833	SAMEA112904807	Probiotic
0.98	SAMEA9449952	SAMEA112905334	Probiotic
0.98	SAMEA7571826	SAMEA112905123	Probiotic
0.98	SAMEA9449947	SAMEA112905276	Prebiotic
0.98	SAMEA7722476	SAMEA112904871	Control