MGYG000308453

Taxonomy

Prevotella sp000433175 Bacteria > Bacteroidota > Bacteroidia > Bacteroidales > Bacteroidaceae > Prevotella > Prevotella sp000433175

Cluster representative

MGYG000317513

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000317513 on MGnify
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Annotations

MGYG000308453’s cluster representative genome MGYG000317513 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000317513 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308453 Copy API Endpoint

MGYG000308453’s cluster representative (MGYG000317513) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000317513’s sequence. Because MGYG000308453 has been clustered with MGYG000317513 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308453.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000317513

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA10105025	SAMEA112904944	Prebiotic
1.00	SAMEA10105042	SAMEA112905339	Probiotic
1.00	SAMEA9449928	SAMEA112904898	Prebiotic
1.00	SAMEA10145589	SAMEA112904854	Control
1.00	SAMEA9449923	SAMEA112904816	Probiotic
1.00	SAMEA7697624	SAMEA112905336	Probiotic
1.00	SAMEA10145599	SAMEA112905287	Control
1.00	SAMEA7697630	SAMEA112904928	Control
1.00	SAMEA10145601	SAMEA112905257	Control
1.00	SAMEA7571864	SAMEA112904748	Probiotic