MGYG000308398

Taxonomy

Merdousia sp001917305 Bacteria > Verrucomicrobiota > Verrucomicrobiae > Opitutales > CAG-312 > Merdousia > Merdousia sp001917305

Cluster representative

MGYG000309943

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000309943 on MGnify
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Annotations

MGYG000308398’s cluster representative genome MGYG000309943 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000309943 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308398 Copy API Endpoint

MGYG000308398’s cluster representative (MGYG000309943) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000309943’s sequence. Because MGYG000308398 has been clustered with MGYG000309943 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308398.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000309943

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Containment	Sample accession	Animal accession	Treatment
1.00	SAMEA7025287	SAMEA112905268	Prebiotic
1.00	SAMEA7025275	SAMEA112905332	Probiotic
1.00	SAMEA7571768	SAMEA112905198	Control
1.00	SAMEA9449947	SAMEA112905276	Prebiotic
1.00	SAMEA7025289	SAMEA112905253	Control
1.00	SAMEA7025286	SAMEA112904985	Prebiotic
1.00	SAMEA7571868	SAMEA112904925	Prebiotic
1.00	SAMEA7025277	SAMEA112905229	Control
1.00	SAMEA7697633	SAMEA112904818	Prebiotic
1.00	SAMEA10145587	SAMEA112905124	Control