MGYG000308391

Taxonomy

Hungatella pullicola Bacteria > Firmicutes_A > Clostridia > Lachnospirales > Lachnospiraceae > Hungatella > Hungatella pullicola

Cluster representative

MGYG000319262

Genomes in MGnify Genome Catalogues are clustered by sequence similarity, at the species level. A cluster representative genome is chosen as the best quality genome for each cluster. This representative may or may not be from HoloFood data.

 View MGYG000319262 on MGnify
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Annotations

MGYG000308391’s cluster representative genome MGYG000319262 has been annotated by MGnify’s Genomes pipeline. CAZy (Carbohydrate-Active enZymes) annotations are particularly relevant to HoloFood’s experimental goals, and this graphic shows the number of CAZy annotations on MGYG000319262 from each CAZy category.

API endpoint

/api/genome-catalogues/chicken-gut-v2-0/genomes/MGYG000308391 Copy API Endpoint

MGYG000308391’s cluster representative (MGYG000319262) has been searched for in all HoloFood samples, using a sourmash-based tool. These samples contain some or all of the kmers in MGYG000319262’s sequence. Because MGYG000308391 has been clustered with MGYG000319262 at 95% sequence similarity, this indicates that these samples are likely to contain MGYG000308391.

Filter containing samples

Sample accession contains

Sample animal accession contains

Minimum containment

Fraction of MAG kmers present in samples

Samples containing cluster representative MGYG000319262

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Containment	Sample accession	Animal accession	Treatment
0.95	SAMEA7025237	SAMEA112904879	Probiotic
0.95	SAMEA7571769	SAMEA112904793	Prebiotic
0.95	SAMEA7025266	SAMEA112905005	Probiotic
0.94	SAMEA10104922	SAMEA112905139	Prebiotic
0.94	SAMEA9449894	SAMEA112905203	Probiotic
0.94	SAMEA7571770	SAMEA112905193	Probiotic
0.94	SAMEA7571816	SAMEA112904788	Prebiotic
0.94	SAMEA7025239	SAMEA112905167	Probiotic
0.94	SAMEA7697578	SAMEA112905016	Control
0.94	SAMEA10104926	SAMEA112905372	Prebiotic