HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ4933522.29013-NODE-29013-length-1801-cov-3.166094|viral_sequence ERZ4933522.29013-NODE-29013-length-1801-cov-3.166094 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933522.3115-NODE-3115-length-8447-cov-6.610105|viral_sequence ERZ4933522.3115-NODE-3115-length-8447-cov-6.610105 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ4933522.316-NODE-316-length-41449-cov-7.861864|viral_sequence ERZ4933522.316-NODE-316-length-41449-cov-7.861864 viral_sequence Efquatrovirus View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933522.317-NODE-317-length-41446-cov-7.769563|viral_sequence ERZ4933522.317-NODE-317-length-41446-cov-7.769563 viral_sequence View contig
Cluster representative of 7 other viral fragments. View cluster
ERZ4933522.32359-NODE-32359-length-1671-cov-2.382426|viral_sequence ERZ4933522.32359-NODE-32359-length-1671-cov-2.382426 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933522.33805-NODE-33805-length-1622-cov-3.120613|viral_sequence ERZ4933522.33805-NODE-33805-length-1622-cov-3.120613 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933522.3420-NODE-3420-length-7861-cov-6.465155|viral_sequence ERZ4933522.3420-NODE-3420-length-7861-cov-6.465155 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933522.3540-NODE-3540-length-7667-cov-9.006043|viral_sequence ERZ4933522.3540-NODE-3540-length-7667-cov-9.006043 viral_sequence View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ4933522.3959-NODE-3959-length-7051-cov-12.230846|viral_sequence ERZ4933522.3959-NODE-3959-length-7051-cov-12.230846 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ4933522.3984-NODE-3984-length-7029-cov-6.329079|viral_sequence ERZ4933522.3984-NODE-3984-length-7029-cov-6.329079 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue