HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ4933514.5228-NODE-5228-length-7074-cov-4.958399|viral_sequence ERZ4933514.5228-NODE-5228-length-7074-cov-4.958399 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ4933514.5292-NODE-5292-length-6982-cov-5.111159|viral_sequence ERZ4933514.5292-NODE-5292-length-6982-cov-5.111159 viral_sequence View contig
Cluster representative of 5 other viral fragments. View cluster
ERZ4933514.555-NODE-555-length-34543-cov-6.059441|viral_sequence ERZ4933514.555-NODE-555-length-34543-cov-6.059441 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ4933514.5557-NODE-5557-length-6728-cov-5.985464|viral_sequence ERZ4933514.5557-NODE-5557-length-6728-cov-5.985464 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933514.5564-NODE-5564-length-6718-cov-5.657362|viral_sequence ERZ4933514.5564-NODE-5564-length-6718-cov-5.657362 viral_sequence Arquatrovirinae View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ4933514.573-NODE-573-length-33759-cov-16.758634|viral_sequence ERZ4933514.573-NODE-573-length-33759-cov-16.758634 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ4933514.6168-NODE-6168-length-6149-cov-4.660322|viral_sequence ERZ4933514.6168-NODE-6168-length-6149-cov-4.660322 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933514.6697-NODE-6697-length-5727-cov-5.335860|viral_sequence ERZ4933514.6697-NODE-6697-length-5727-cov-5.335860 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933514.6937-NODE-6937-length-5571-cov-7.543147|viral_sequence ERZ4933514.6937-NODE-6937-length-5571-cov-7.543147 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933514.7604-NODE-7604-length-5164-cov-6.706205|viral_sequence ERZ4933514.7604-NODE-7604-length-5164-cov-6.706205 viral_sequence Arquatrovirinae View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue