HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ4933509.20396-NODE-20396-length-1567-cov-108.811508|viral_sequence ERZ4933509.20396-NODE-20396-length-1567-cov-108.811508 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933509.2227-NODE-2227-length-8838-cov-4.874872|viral_sequence ERZ4933509.2227-NODE-2227-length-8838-cov-4.874872 viral_sequence Brockvirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933509.226-NODE-226-length-37147-cov-17.541330|viral_sequence ERZ4933509.226-NODE-226-length-37147-cov-17.541330 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933509.233-NODE-233-length-36806-cov-17.453185|prophage-961:26269 ERZ4933509.233-NODE-233-length-36806-cov-17.453185 prophage View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ4933509.2359-NODE-2359-length-8501-cov-29.671442|viral_sequence ERZ4933509.2359-NODE-2359-length-8501-cov-29.671442 viral_sequence Sepvirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933509.242-NODE-242-length-36254-cov-23.324539|viral_sequence ERZ4933509.242-NODE-242-length-36254-cov-23.324539 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ4933509.253-NODE-253-length-35386-cov-16.831225|prophage-1:24629 ERZ4933509.253-NODE-253-length-35386-cov-16.831225 prophage View contig
Cluster representative of 8 other viral fragments. View cluster
ERZ4933509.292-NODE-292-length-32575-cov-6.337823|prophage-14939:31449 ERZ4933509.292-NODE-292-length-32575-cov-6.337823 prophage View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933509.3094-NODE-3094-length-7001-cov-5.855024|viral_sequence ERZ4933509.3094-NODE-3094-length-7001-cov-5.855024 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ4933509.3123-NODE-3123-length-6962-cov-6.017663|viral_sequence ERZ4933509.3123-NODE-3123-length-6962-cov-6.017663 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue