HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916702.22120-NODE-22120-length-4796-cov-7.031850|viral_sequence ERZ2916702.22120-NODE-22120-length-4796-cov-7.031850 viral_sequence Viewing
Cluster representative of 0 other viral fragments. View cluster
ERZ2916702.2219-NODE-2219-length-37714-cov-67.146366|prophage-19391:29147 ERZ2916702.2219-NODE-2219-length-37714-cov-67.146366 prophage View contig
Cluster representative of 23 other viral fragments. View cluster
ERZ2916702.22196-NODE-22196-length-4780-cov-6.196402|viral_sequence ERZ2916702.22196-NODE-22196-length-4780-cov-6.196402 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916702.22310-NODE-22310-length-4759-cov-5.499362|viral_sequence ERZ2916702.22310-NODE-22310-length-4759-cov-5.499362 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916702.22549-NODE-22549-length-4713-cov-12.884500|viral_sequence ERZ2916702.22549-NODE-22549-length-4713-cov-12.884500 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916702.2262-NODE-2262-length-37275-cov-102.683611|viral_sequence ERZ2916702.2262-NODE-2262-length-37275-cov-102.683611 viral_sequence View contig
Cluster representative of 23 other viral fragments. View cluster
ERZ2916702.22691-NODE-22691-length-4684-cov-7.158566|viral_sequence ERZ2916702.22691-NODE-22691-length-4684-cov-7.158566 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916702.22757-NODE-22757-length-4669-cov-4.105982|viral_sequence ERZ2916702.22757-NODE-22757-length-4669-cov-4.105982 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916702.2278-NODE-2278-length-37028-cov-30.535499|viral_sequence ERZ2916702.2278-NODE-2278-length-37028-cov-30.535499 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916702.22856-NODE-22856-length-4649-cov-3.483892|viral_sequence ERZ2916702.22856-NODE-22856-length-4649-cov-3.483892 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue