HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916642.4196-NODE-4196-length-13681-cov-12.788493|viral_sequence ERZ2916642.4196-NODE-4196-length-13681-cov-12.788493 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916642.44293-NODE-44293-length-1937-cov-4.172689|viral_sequence ERZ2916642.44293-NODE-44293-length-1937-cov-4.172689 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916642.47160-NODE-47160-length-1837-cov-3.904040|viral_sequence ERZ2916642.47160-NODE-47160-length-1837-cov-3.904040 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916642.4777-NODE-4777-length-12359-cov-10.114759|viral_sequence ERZ2916642.4777-NODE-4777-length-12359-cov-10.114759 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916642.50768-NODE-50768-length-1727-cov-3.046651|viral_sequence ERZ2916642.50768-NODE-50768-length-1727-cov-3.046651 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916642.511-NODE-511-length-58788-cov-12.705208|viral_sequence ERZ2916642.511-NODE-511-length-58788-cov-12.705208 viral_sequence Viewing
Cluster representative of 34 other viral fragments. View cluster
ERZ2916642.518-NODE-518-length-58175-cov-23.119184|prophage-3198:40662 ERZ2916642.518-NODE-518-length-58175-cov-23.119184 prophage View contig
Cluster representative of 14 other viral fragments. View cluster
ERZ2916642.51909-NODE-51909-length-1696-cov-2.591712|viral_sequence ERZ2916642.51909-NODE-51909-length-1696-cov-2.591712 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916642.53-NODE-53-length-184857-cov-35.834536|prophage-103837:142160 ERZ2916642.53-NODE-53-length-184857-cov-35.834536 prophage View contig
Cluster representative of 9 other viral fragments. View cluster
ERZ2916642.5444-NODE-5444-length-11108-cov-8.151000|viral_sequence ERZ2916642.5444-NODE-5444-length-11108-cov-8.151000 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue