HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916551.1714-NODE-1714-length-10527-cov-4.811975|viral_sequence ERZ2916551.1714-NODE-1714-length-10527-cov-4.811975 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916551.1731-NODE-1731-length-10415-cov-3.874807|viral_sequence ERZ2916551.1731-NODE-1731-length-10415-cov-3.874807 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916551.17831-NODE-17831-length-1944-cov-2.775543|viral_sequence ERZ2916551.17831-NODE-17831-length-1944-cov-2.775543 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916551.192-NODE-192-length-63006-cov-9.331210|prophage-27971:62899 ERZ2916551.192-NODE-192-length-63006-cov-9.331210 prophage View contig
Cluster representative of 11 other viral fragments. View cluster
ERZ2916551.20349-NODE-20349-length-1775-cov-2.165116|viral_sequence ERZ2916551.20349-NODE-20349-length-1775-cov-2.165116 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916551.2264-NODE-2264-length-8367-cov-3.535731|viral_sequence ERZ2916551.2264-NODE-2264-length-8367-cov-3.535731 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916551.2439-NODE-2439-length-7864-cov-9.629786|viral_sequence ERZ2916551.2439-NODE-2439-length-7864-cov-9.629786 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916551.2604-NODE-2604-length-7520-cov-10.225184|viral_sequence ERZ2916551.2604-NODE-2604-length-7520-cov-10.225184 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916551.3221-NODE-3221-length-6393-cov-4.446040|viral_sequence ERZ2916551.3221-NODE-3221-length-6393-cov-4.446040 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916551.34-NODE-34-length-145729-cov-13.622349|viral_sequence ERZ2916551.34-NODE-34-length-145729-cov-13.622349 viral_sequence View contig
Cluster representative of 20 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue