HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916604.1722-NODE-1722-length-19249-cov-11.970564|viral_sequence ERZ2916604.1722-NODE-1722-length-19249-cov-11.970564 viral_sequence View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2916604.18226-NODE-18226-length-3735-cov-21.329620|viral_sequence ERZ2916604.18226-NODE-18226-length-3735-cov-21.329620 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916604.1892-NODE-1892-length-18190-cov-384.256673|viral_sequence ERZ2916604.1892-NODE-1892-length-18190-cov-384.256673 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916604.19856-NODE-19856-length-3514-cov-3.593524|viral_sequence ERZ2916604.19856-NODE-19856-length-3514-cov-3.593524 viral_sequence Viewing
Cluster representative of 0 other viral fragments. View cluster
ERZ2916604.20578-NODE-20578-length-3424-cov-5.417631|viral_sequence ERZ2916604.20578-NODE-20578-length-3424-cov-5.417631 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916604.20580-NODE-20580-length-3424-cov-4.231226|viral_sequence ERZ2916604.20580-NODE-20580-length-3424-cov-4.231226 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916604.20907-NODE-20907-length-3388-cov-23.701470|viral_sequence ERZ2916604.20907-NODE-20907-length-3388-cov-23.701470 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916604.20954-NODE-20954-length-3384-cov-4.143587|viral_sequence ERZ2916604.20954-NODE-20954-length-3384-cov-4.143587 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916604.21309-NODE-21309-length-3342-cov-4.306663|viral_sequence ERZ2916604.21309-NODE-21309-length-3342-cov-4.306663 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916604.21333-NODE-21333-length-3339-cov-2.379415|viral_sequence ERZ2916604.21333-NODE-21333-length-3339-cov-2.379415 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue