HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916600.4764-NODE-4764-length-11200-cov-12.708300|viral_sequence ERZ2916600.4764-NODE-4764-length-11200-cov-12.708300 viral_sequence Guernseyvirinae View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916600.48058-NODE-48058-length-1776-cov-6.072051|viral_sequence ERZ2916600.48058-NODE-48058-length-1776-cov-6.072051 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916600.4853-NODE-4853-length-11041-cov-11.272620|viral_sequence ERZ2916600.4853-NODE-4853-length-11041-cov-11.272620 viral_sequence View contig
Cluster representative of 6 other viral fragments. View cluster
ERZ2916600.4943-NODE-4943-length-10876-cov-5.825340|viral_sequence ERZ2916600.4943-NODE-4943-length-10876-cov-5.825340 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916600.49736-NODE-49736-length-1732-cov-4.969589|viral_sequence ERZ2916600.49736-NODE-49736-length-1732-cov-4.969589 viral_sequence Sepvirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916600.50195-NODE-50195-length-1721-cov-3.181873|viral_sequence ERZ2916600.50195-NODE-50195-length-1721-cov-3.181873 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916600.5076-NODE-5076-length-10615-cov-72.412027|viral_sequence ERZ2916600.5076-NODE-5076-length-10615-cov-72.412027 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916600.51146-NODE-51146-length-1696-cov-3.922608|viral_sequence ERZ2916600.51146-NODE-51146-length-1696-cov-3.922608 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916600.52285-NODE-52285-length-1669-cov-6.329616|viral_sequence ERZ2916600.52285-NODE-52285-length-1669-cov-6.329616 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916600.53556-NODE-53556-length-1640-cov-2.741956|viral_sequence ERZ2916600.53556-NODE-53556-length-1640-cov-2.741956 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue