HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916587.29587-NODE-29587-length-3122-cov-12.658950|viral_sequence ERZ2916587.29587-NODE-29587-length-3122-cov-12.658950 viral_sequence Sepvirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916587.29714-NODE-29714-length-3112-cov-3.512594|viral_sequence ERZ2916587.29714-NODE-29714-length-3112-cov-3.512594 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916587.29725-NODE-29725-length-3111-cov-4.045157|viral_sequence ERZ2916587.29725-NODE-29725-length-3111-cov-4.045157 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916587.30602-NODE-30602-length-3043-cov-4.108768|viral_sequence ERZ2916587.30602-NODE-30602-length-3043-cov-4.108768 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916587.31-NODE-31-length-216325-cov-12.839834|prophage-1:123110 ERZ2916587.31-NODE-31-length-216325-cov-12.839834 prophage View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916587.31179-NODE-31179-length-3001-cov-2.760692|viral_sequence ERZ2916587.31179-NODE-31179-length-3001-cov-2.760692 viral_sequence Tunavirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916587.31184-NODE-31184-length-3000-cov-6.255008|viral_sequence ERZ2916587.31184-NODE-31184-length-3000-cov-6.255008 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916587.31204-NODE-31204-length-2999-cov-4.134511|viral_sequence ERZ2916587.31204-NODE-31204-length-2999-cov-4.134511 viral_sequence Spounavirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916587.31308-NODE-31308-length-2992-cov-2.976507|viral_sequence ERZ2916587.31308-NODE-31308-length-2992-cov-2.976507 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916587.3143-NODE-3143-length-17131-cov-7.378660|viral_sequence ERZ2916587.3143-NODE-3143-length-17131-cov-7.378660 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue