HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916581.237-NODE-237-length-76510-cov-24.821490|prophage-47138:58184 ERZ2916581.237-NODE-237-length-76510-cov-24.821490 prophage View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2916581.2682-NODE-2682-length-13994-cov-6.728818|viral_sequence ERZ2916581.2682-NODE-2682-length-13994-cov-6.728818 viral_sequence Nymbaxtervirinae Viewing
Cluster representative of 1 other viral fragment. View cluster
ERZ2916581.2779-NODE-2779-length-13554-cov-8.226017|viral_sequence ERZ2916581.2779-NODE-2779-length-13554-cov-8.226017 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916581.29414-NODE-29414-length-1879-cov-2.859649|viral_sequence ERZ2916581.29414-NODE-29414-length-1879-cov-2.859649 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916581.2944-NODE-2944-length-12843-cov-24.893885|viral_sequence ERZ2916581.2944-NODE-2944-length-12843-cov-24.893885 viral_sequence View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2916581.29880-NODE-29880-length-1859-cov-3.292683|viral_sequence ERZ2916581.29880-NODE-29880-length-1859-cov-3.292683 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916581.31564-NODE-31564-length-1791-cov-1.978111|viral_sequence ERZ2916581.31564-NODE-31564-length-1791-cov-1.978111 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916581.31598-NODE-31598-length-1789-cov-6.807958|viral_sequence ERZ2916581.31598-NODE-31598-length-1789-cov-6.807958 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916581.32566-NODE-32566-length-1752-cov-1.991750|viral_sequence ERZ2916581.32566-NODE-32566-length-1752-cov-1.991750 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916581.33377-NODE-33377-length-1721-cov-5.730492|viral_sequence ERZ2916581.33377-NODE-33377-length-1721-cov-5.730492 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue