HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916534.5084-NODE-5084-length-10081-cov-9.005187|viral_sequence ERZ2916534.5084-NODE-5084-length-10081-cov-9.005187 viral_sequence Viewing
Cluster representative of 4 other viral fragments. View cluster
ERZ2916534.5229-NODE-5229-length-9845-cov-3.489888|viral_sequence ERZ2916534.5229-NODE-5229-length-9845-cov-3.489888 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.5349-NODE-5349-length-9653-cov-13.393832|viral_sequence ERZ2916534.5349-NODE-5349-length-9653-cov-13.393832 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916534.54-NODE-54-length-166893-cov-12.365025|prophage-2321:117173 ERZ2916534.54-NODE-54-length-166893-cov-12.365025 prophage View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.547-NODE-547-length-50942-cov-8.763279_2_241|viral_sequence ERZ2916534.547-NODE-547-length-50942-cov-8.763279_2_241 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.55374-NODE-55374-length-1648-cov-2.682360|viral_sequence ERZ2916534.55374-NODE-55374-length-1648-cov-2.682360 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916534.56113-NODE-56113-length-1633-cov-1.896705|viral_sequence ERZ2916534.56113-NODE-56113-length-1633-cov-1.896705 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916534.57802-NODE-57802-length-1597-cov-5.448768|viral_sequence ERZ2916534.57802-NODE-57802-length-1597-cov-5.448768 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.5960-NODE-5960-length-8866-cov-4.483827|viral_sequence ERZ2916534.5960-NODE-5960-length-8866-cov-4.483827 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916534.5965-NODE-5965-length-8863-cov-4.982289|viral_sequence ERZ2916534.5965-NODE-5965-length-8863-cov-4.982289 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue