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Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

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Viral sequence ID Parent contig Type Taxonomy View
ERZ2916523.11028-NODE-11028-length-2927-cov-3.170961|viral_sequence ERZ2916523.11028-NODE-11028-length-2927-cov-3.170961 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916523.1301-NODE-1301-length-14399-cov-8.931051|prophage-156:12439 ERZ2916523.1301-NODE-1301-length-14399-cov-8.931051 prophage View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916523.1317-NODE-1317-length-14298-cov-9.791055|viral_sequence ERZ2916523.1317-NODE-1317-length-14298-cov-9.791055 viral_sequence View contig
Cluster representative of 9 other viral fragments. View cluster
ERZ2916523.1477-NODE-1477-length-13319-cov-7.099291|viral_sequence ERZ2916523.1477-NODE-1477-length-13319-cov-7.099291 viral_sequence Arquatrovirinae View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916523.1602-NODE-1602-length-12542-cov-6.491311|viral_sequence ERZ2916523.1602-NODE-1602-length-12542-cov-6.491311 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916523.16684-NODE-16684-length-2108-cov-8.582562|viral_sequence ERZ2916523.16684-NODE-16684-length-2108-cov-8.582562 viral_sequence View contig
Cluster representative of 12 other viral fragments. View cluster
ERZ2916523.20034-NODE-20034-length-1821-cov-10.838052|viral_sequence ERZ2916523.20034-NODE-20034-length-1821-cov-10.838052 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916523.2052-NODE-2052-length-10568-cov-5.877295|viral_sequence ERZ2916523.2052-NODE-2052-length-10568-cov-5.877295 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2916523.21755-NODE-21755-length-1710-cov-2.729909|viral_sequence ERZ2916523.21755-NODE-21755-length-1710-cov-2.729909 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916523.227-NODE-227-length-38648-cov-9.173140|viral_sequence ERZ2916523.227-NODE-227-length-38648-cov-9.173140 viral_sequence Tunavirinae View contig
Cluster representative of 2 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue