HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916457.681-NODE-681-length-55544-cov-97.519148_234_589|prophage-31150:55544 ERZ2916457.681-NODE-681-length-55544-cov-97.519148_234_589 prophage Viewing
Cluster representative of 6 other viral fragments. View cluster
ERZ2916457.68342-NODE-68342-length-1578-cov-3.916612|viral_sequence ERZ2916457.68342-NODE-68342-length-1578-cov-3.916612 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.68645-NODE-68645-length-1572-cov-4.015162|viral_sequence ERZ2916457.68645-NODE-68645-length-1572-cov-4.015162 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.69041-NODE-69041-length-1564-cov-2.685222_737_925|viral_sequence ERZ2916457.69041-NODE-69041-length-1564-cov-2.685222_737_925 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.6923-NODE-6923-length-12232-cov-20.155129|viral_sequence ERZ2916457.6923-NODE-6923-length-12232-cov-20.155129 viral_sequence View contig
Cluster representative of 3 other viral fragments. View cluster
ERZ2916457.7081-NODE-7081-length-11988-cov-22.445487|viral_sequence ERZ2916457.7081-NODE-7081-length-11988-cov-22.445487 viral_sequence View contig
Cluster representative of 5 other viral fragments. View cluster
ERZ2916457.7291-NODE-7291-length-11686-cov-30.139025|viral_sequence ERZ2916457.7291-NODE-7291-length-11686-cov-30.139025 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.7700-NODE-7700-length-11145-cov-15.136970|viral_sequence ERZ2916457.7700-NODE-7700-length-11145-cov-15.136970 viral_sequence View contig
Cluster representative of 10 other viral fragments. View cluster
ERZ2916457.7784-NODE-7784-length-11033-cov-27.516032|viral_sequence ERZ2916457.7784-NODE-7784-length-11033-cov-27.516032 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.7847-NODE-7847-length-10960-cov-8.830353|viral_sequence ERZ2916457.7847-NODE-7847-length-10960-cov-8.830353 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue