HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916457.493-NODE-493-length-64104-cov-41.488220|prophage-1:45002 ERZ2916457.493-NODE-493-length-64104-cov-41.488220 prophage View contig
Cluster representative of 18 other viral fragments. View cluster
ERZ2916457.49611-NODE-49611-length-2077-cov-2.595450|viral_sequence ERZ2916457.49611-NODE-49611-length-2077-cov-2.595450 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.5184-NODE-5184-length-15473-cov-8.077831|viral_sequence ERZ2916457.5184-NODE-5184-length-15473-cov-8.077831 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916457.521-NODE-521-length-62871-cov-15.836172|prophage-26383:62799 ERZ2916457.521-NODE-521-length-62871-cov-15.836172 prophage View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.5315-NODE-5315-length-15179-cov-20.090452|viral_sequence ERZ2916457.5315-NODE-5315-length-15179-cov-20.090452 viral_sequence View contig
Cluster representative of 12 other viral fragments. View cluster
ERZ2916457.5360-NODE-5360-length-15093-cov-6.731081|viral_sequence ERZ2916457.5360-NODE-5360-length-15093-cov-6.731081 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.55201-NODE-55201-length-1893-cov-2.381937|viral_sequence ERZ2916457.55201-NODE-55201-length-1893-cov-2.381937 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.5688-NODE-5688-length-14355-cov-4.634126|viral_sequence ERZ2916457.5688-NODE-5688-length-14355-cov-4.634126 viral_sequence Viewing
Cluster representative of 1 other viral fragment. View cluster
ERZ2916457.56983-NODE-56983-length-1841-cov-2.537514|viral_sequence ERZ2916457.56983-NODE-56983-length-1841-cov-2.537514 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916457.5743-NODE-5743-length-14217-cov-13.068423|viral_sequence ERZ2916457.5743-NODE-5743-length-14217-cov-13.068423 viral_sequence View contig
Cluster representative of 27 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue