HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916414.24148-NODE-24148-length-1870-cov-2.690358|viral_sequence ERZ2916414.24148-NODE-24148-length-1870-cov-2.690358 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916414.245-NODE-245-length-88581-cov-31.108183|prophage-22374:62710 ERZ2916414.245-NODE-245-length-88581-cov-31.108183 prophage View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916414.25530-NODE-25530-length-1773-cov-7.916182|viral_sequence ERZ2916414.25530-NODE-25530-length-1773-cov-7.916182 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916414.2575-NODE-2575-length-18371-cov-7.124700|viral_sequence ERZ2916414.2575-NODE-2575-length-18371-cov-7.124700 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916414.2602-NODE-2602-length-18159-cov-36.884169|viral_sequence ERZ2916414.2602-NODE-2602-length-18159-cov-36.884169 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916414.2640-NODE-2640-length-17905-cov-123.298543|viral_sequence ERZ2916414.2640-NODE-2640-length-17905-cov-123.298543 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916414.27420-NODE-27420-length-1661-cov-2.339975|viral_sequence ERZ2916414.27420-NODE-27420-length-1661-cov-2.339975 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916414.2751-NODE-2751-length-17208-cov-21.255815|viral_sequence ERZ2916414.2751-NODE-2751-length-17208-cov-21.255815 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916414.3026-NODE-3026-length-15722-cov-10.685390|viral_sequence ERZ2916414.3026-NODE-3026-length-15722-cov-10.685390 viral_sequence Mccleskeyvirinae View contig
Cluster representative of 41 other viral fragments. View cluster
ERZ2916414.3124-NODE-3124-length-15152-cov-5.939723|viral_sequence ERZ2916414.3124-NODE-3124-length-15152-cov-5.939723 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue