HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916404.8965-NODE-8965-length-3297-cov-3.357187|viral_sequence ERZ2916404.8965-NODE-8965-length-3297-cov-3.357187 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916404.9072-NODE-9072-length-3270-cov-4.662830|viral_sequence ERZ2916404.9072-NODE-9072-length-3270-cov-4.662830 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916404.9114-NODE-9114-length-3254-cov-6.133479|viral_sequence ERZ2916404.9114-NODE-9114-length-3254-cov-6.133479 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916404.919-NODE-919-length-20214-cov-28.863833|viral_sequence ERZ2916404.919-NODE-919-length-20214-cov-28.863833 viral_sequence Arquatrovirinae View contig
Cluster representative of 17 other viral fragments. View cluster
ERZ2916407.10119-NODE-10119-length-3613-cov-3.945756|viral_sequence ERZ2916407.10119-NODE-10119-length-3613-cov-3.945756 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916407.1039-NODE-1039-length-23702-cov-17.720726|viral_sequence ERZ2916407.1039-NODE-1039-length-23702-cov-17.720726 viral_sequence Viewing
Cluster representative of 49 other viral fragments. View cluster
ERZ2916407.1047-NODE-1047-length-23616-cov-77.912016|prophage-2625:18637 ERZ2916407.1047-NODE-1047-length-23616-cov-77.912016 prophage View contig
Cluster representative of 11 other viral fragments. View cluster
ERZ2916407.10684-NODE-10684-length-3464-cov-3.774421|viral_sequence ERZ2916407.10684-NODE-10684-length-3464-cov-3.774421 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916407.11099-NODE-11099-length-3373-cov-4.523810|viral_sequence ERZ2916407.11099-NODE-11099-length-3373-cov-4.523810 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916407.11900-NODE-11900-length-3216-cov-3.976273|viral_sequence ERZ2916407.11900-NODE-11900-length-3216-cov-3.976273 viral_sequence View contig
Cluster representative of 3 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue