HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916356.5893-NODE-5893-length-4941-cov-8.704052|viral_sequence ERZ2916356.5893-NODE-5893-length-4941-cov-8.704052 viral_sequence View contig
Cluster representative of 12 other viral fragments. View cluster
ERZ2916356.63-NODE-63-length-124665-cov-140.175973|viral_sequence ERZ2916356.63-NODE-63-length-124665-cov-140.175973 viral_sequence View contig
Cluster representative of 37 other viral fragments. View cluster
ERZ2916356.6426-NODE-6426-length-4566-cov-14.299933|viral_sequence ERZ2916356.6426-NODE-6426-length-4566-cov-14.299933 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916356.6462-NODE-6462-length-4537-cov-10.119589|viral_sequence ERZ2916356.6462-NODE-6462-length-4537-cov-10.119589 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2916356.65-NODE-65-length-123570-cov-21.328414|prophage-41311:119411 ERZ2916356.65-NODE-65-length-123570-cov-21.328414 prophage View contig
Cluster representative of 5 other viral fragments. View cluster
ERZ2916356.6520-NODE-6520-length-4505-cov-5.417079|viral_sequence ERZ2916356.6520-NODE-6520-length-4505-cov-5.417079 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916356.695-NODE-695-length-29202-cov-49.580403|viral_sequence ERZ2916356.695-NODE-695-length-29202-cov-49.580403 viral_sequence View contig
Cluster representative of 9 other viral fragments. View cluster
ERZ2916356.7064-NODE-7064-length-4177-cov-3.611111|viral_sequence ERZ2916356.7064-NODE-7064-length-4177-cov-3.611111 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916356.7330-NODE-7330-length-4032-cov-5.058335|viral_sequence ERZ2916356.7330-NODE-7330-length-4032-cov-5.058335 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916356.766-NODE-766-length-26845-cov-10.532437|viral_sequence ERZ2916356.766-NODE-766-length-26845-cov-10.532437 viral_sequence View contig
Cluster representative of 3 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue