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Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

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Viral sequence ID Parent contig Type Taxonomy View
ERZ2916386.1170-NODE-1170-length-23630-cov-20.666511|viral_sequence ERZ2916386.1170-NODE-1170-length-23630-cov-20.666511 viral_sequence View contig
Cluster representative of 11 other viral fragments. View cluster
ERZ2916386.15662-NODE-15662-length-2187-cov-5.253283|viral_sequence ERZ2916386.15662-NODE-15662-length-2187-cov-5.253283 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916386.1657-NODE-1657-length-17589-cov-8.143093|viral_sequence ERZ2916386.1657-NODE-1657-length-17589-cov-8.143093 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2916386.16908-NODE-16908-length-2049-cov-3.419258|viral_sequence ERZ2916386.16908-NODE-16908-length-2049-cov-3.419258 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916386.20-NODE-20-length-242708-cov-32.214327|prophage-619:39726 ERZ2916386.20-NODE-20-length-242708-cov-32.214327 prophage View contig
Cluster representative of 14 other viral fragments. View cluster
ERZ2916386.2221-NODE-2221-length-13446-cov-14.762676|viral_sequence ERZ2916386.2221-NODE-2221-length-13446-cov-14.762676 viral_sequence Viewing
Cluster representative of 8 other viral fragments. View cluster
ERZ2916386.23370-NODE-23370-length-1571-cov-3.133905|viral_sequence ERZ2916386.23370-NODE-23370-length-1571-cov-3.133905 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916386.2406-NODE-2406-length-12568-cov-4.725086|viral_sequence ERZ2916386.2406-NODE-2406-length-12568-cov-4.725086 viral_sequence Arquatrovirinae View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2916386.279-NODE-279-length-68532-cov-12.149948_110_557|prophage-48207:68453 ERZ2916386.279-NODE-279-length-68532-cov-12.149948_110_557 prophage View contig
Cluster representative of 3 other viral fragments. View cluster
ERZ2916386.2837-NODE-2837-length-10834-cov-16.077187|viral_sequence ERZ2916386.2837-NODE-2837-length-10834-cov-16.077187 viral_sequence View contig
Cluster representative of 7 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue