HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2916341.3808-NODE-3808-length-8532-cov-27.592191|viral_sequence ERZ2916341.3808-NODE-3808-length-8532-cov-27.592191 viral_sequence Bastillevirinae Viewing
Cluster representative of 1 other viral fragment. View cluster
ERZ2916341.4109-NODE-4109-length-7935-cov-4.775761|viral_sequence ERZ2916341.4109-NODE-4109-length-7935-cov-4.775761 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916341.4174-NODE-4174-length-7816-cov-5.551733|viral_sequence ERZ2916341.4174-NODE-4174-length-7816-cov-5.551733 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916341.43-NODE-43-length-172900-cov-49.938598|prophage-20881:138965 ERZ2916341.43-NODE-43-length-172900-cov-49.938598 prophage View contig
Cluster representative of 51 other viral fragments. View cluster
ERZ2916341.461-NODE-461-length-51179-cov-21.992900|viral_sequence ERZ2916341.461-NODE-461-length-51179-cov-21.992900 viral_sequence Brockvirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916341.4719-NODE-4719-length-6872-cov-20.723045|viral_sequence ERZ2916341.4719-NODE-4719-length-6872-cov-20.723045 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916341.5281-NODE-5281-length-6088-cov-20.082380|viral_sequence ERZ2916341.5281-NODE-5281-length-6088-cov-20.082380 viral_sequence View contig
Cluster representative of 5 other viral fragments. View cluster
ERZ2916341.549-NODE-549-length-44436-cov-14.488633|viral_sequence ERZ2916341.549-NODE-549-length-44436-cov-14.488633 viral_sequence Sepvirinae View contig
Cluster representative of 23 other viral fragments. View cluster
ERZ2916341.5526-NODE-5526-length-5786-cov-6.403943|viral_sequence ERZ2916341.5526-NODE-5526-length-5786-cov-6.403943 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2916341.5547-NODE-5547-length-5758-cov-6.428897|viral_sequence ERZ2916341.5547-NODE-5547-length-5758-cov-6.428897 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue