HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641819.14175-NODE-14175-length-5989-cov-4.920627|viral_sequence ERZ2641819.14175-NODE-14175-length-5989-cov-4.920627 viral_sequence — View contig
Cluster representative of 3 other viral fragments. View cluster
ERZ2641819.14187-NODE-14187-length-5985-cov-5.587015|viral_sequence ERZ2641819.14187-NODE-14187-length-5985-cov-5.587015 viral_sequence Firstpapillomavirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641819.14515-NODE-14515-length-5855-cov-4.329828|viral_sequence ERZ2641819.14515-NODE-14515-length-5855-cov-4.329828 viral_sequence — View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641819.14778-NODE-14778-length-5753-cov-112.352755|viral_sequence ERZ2641819.14778-NODE-14778-length-5753-cov-112.352755 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641819.14877-NODE-14877-length-5717-cov-9.951077|viral_sequence ERZ2641819.14877-NODE-14877-length-5717-cov-9.951077 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641819.14943-NODE-14943-length-5692-cov-7.510555|viral_sequence ERZ2641819.14943-NODE-14943-length-5692-cov-7.510555 viral_sequence — View contig
Cluster representative of 3 other viral fragments. View cluster
ERZ2641819.14992-NODE-14992-length-5672-cov-5.139576|viral_sequence ERZ2641819.14992-NODE-14992-length-5672-cov-5.139576 viral_sequence Tunavirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641819.14994-NODE-14994-length-5671-cov-47.127315_2_340|viral_sequence ERZ2641819.14994-NODE-14994-length-5671-cov-47.127315_2_340 viral_sequence — View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641819.15172-NODE-15172-length-5610-cov-5.416742|viral_sequence ERZ2641819.15172-NODE-15172-length-5610-cov-5.416742 viral_sequence — Viewing
Cluster representative of 0 other viral fragments. View cluster
ERZ2641819.15802-NODE-15802-length-5388-cov-8.177949|viral_sequence ERZ2641819.15802-NODE-15802-length-5388-cov-8.177949 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue