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Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

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Viral sequence ID Parent contig Type Taxonomy View
ERZ2641812.80571-NODE-80571-length-1554-cov-4.178786|viral_sequence ERZ2641812.80571-NODE-80571-length-1554-cov-4.178786 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.81-NODE-81-length-164054-cov-51.186019|prophage-84075:163216 ERZ2641812.81-NODE-81-length-164054-cov-51.186019 prophage — View contig
Cluster representative of 127 other viral fragments. View cluster
ERZ2641812.82014-NODE-82014-length-1532-cov-4.285037|viral_sequence ERZ2641812.82014-NODE-82014-length-1532-cov-4.285037 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.8213-NODE-8213-length-10461-cov-9.851336|viral_sequence ERZ2641812.8213-NODE-8213-length-10461-cov-9.851336 viral_sequence — View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2641812.823-NODE-823-length-46473-cov-37.392757|viral_sequence ERZ2641812.823-NODE-823-length-46473-cov-37.392757 viral_sequence Guernseyvirinae View contig
Cluster representative of 16 other viral fragments. View cluster
ERZ2641812.8272-NODE-8272-length-10390-cov-4.858345|viral_sequence ERZ2641812.8272-NODE-8272-length-10390-cov-4.858345 viral_sequence — View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641812.84095-NODE-84095-length-1502-cov-2.948860|viral_sequence ERZ2641812.84095-NODE-84095-length-1502-cov-2.948860 viral_sequence — Viewing
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.8603-NODE-8603-length-10082-cov-5.172036|viral_sequence ERZ2641812.8603-NODE-8603-length-10082-cov-5.172036 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2641812.861-NODE-861-length-45176-cov-9.113938|viral_sequence ERZ2641812.861-NODE-861-length-45176-cov-9.113938 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 30 other viral fragments. View cluster
ERZ2641812.8744-NODE-8744-length-9957-cov-17.962937|viral_sequence ERZ2641812.8744-NODE-8744-length-9957-cov-17.962937 viral_sequence — View contig
Cluster representative of 3 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue