HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641812.6412-NODE-6412-length-12609-cov-17.629043|viral_sequence ERZ2641812.6412-NODE-6412-length-12609-cov-17.629043 viral_sequence — View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641812.65394-NODE-65394-length-1834-cov-1.910062|viral_sequence ERZ2641812.65394-NODE-65394-length-1834-cov-1.910062 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.65545-NODE-65545-length-1830-cov-5.206761|viral_sequence ERZ2641812.65545-NODE-65545-length-1830-cov-5.206761 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.66195-NODE-66195-length-1816-cov-4.325951|viral_sequence ERZ2641812.66195-NODE-66195-length-1816-cov-4.325951 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.66741-NODE-66741-length-1803-cov-27.414188|viral_sequence ERZ2641812.66741-NODE-66741-length-1803-cov-27.414188 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.6753-NODE-6753-length-12176-cov-56.885901|viral_sequence ERZ2641812.6753-NODE-6753-length-12176-cov-56.885901 viral_sequence — View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641812.67804-NODE-67804-length-1781-cov-3.659328|viral_sequence ERZ2641812.67804-NODE-67804-length-1781-cov-3.659328 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.68841-NODE-68841-length-1759-cov-3.638498|viral_sequence ERZ2641812.68841-NODE-68841-length-1759-cov-3.638498 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.700-NODE-700-length-50720-cov-16.686727|prophage-3596:19933 ERZ2641812.700-NODE-700-length-50720-cov-16.686727 prophage — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641812.709-NODE-709-length-50302-cov-18.028579|viral_sequence ERZ2641812.709-NODE-709-length-50302-cov-18.028579 viral_sequence — View contig
Cluster representative of 23 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue