HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641811.29217-NODE-29217-length-1879-cov-6.714364|viral_sequence ERZ2641811.29217-NODE-29217-length-1879-cov-6.714364 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641811.30154-NODE-30154-length-1842-cov-2.255736|viral_sequence ERZ2641811.30154-NODE-30154-length-1842-cov-2.255736 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641811.3094-NODE-3094-length-8721-cov-6.867413|viral_sequence ERZ2641811.3094-NODE-3094-length-8721-cov-6.867413 viral_sequence — View contig
Cluster representative of 5 other viral fragments. View cluster
ERZ2641811.337-NODE-337-length-39442-cov-9.997385|prophage-10952:39442 ERZ2641811.337-NODE-337-length-39442-cov-9.997385 prophage — View contig
Cluster representative of 6 other viral fragments. View cluster
ERZ2641811.3534-NODE-3534-length-7932-cov-10.765520|viral_sequence ERZ2641811.3534-NODE-3534-length-7932-cov-10.765520 viral_sequence — View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2641811.3669-NODE-3669-length-7764-cov-24.695161_1205_2597|viral_sequence ERZ2641811.3669-NODE-3669-length-7764-cov-24.695161_1205_2597 viral_sequence — View contig
Cluster representative of 15 other viral fragments. View cluster
ERZ2641811.37-NODE-37-length-169864-cov-18.470423|prophage-138198:169625 ERZ2641811.37-NODE-37-length-169864-cov-18.470423 prophage — View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641811.375-NODE-375-length-36968-cov-23.725869|viral_sequence ERZ2641811.375-NODE-375-length-36968-cov-23.725869 viral_sequence — View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2641811.402-NODE-402-length-35000-cov-18.962741|viral_sequence ERZ2641811.402-NODE-402-length-35000-cov-18.962741 viral_sequence — View contig
Cluster representative of 16 other viral fragments. View cluster
ERZ2641811.4127-NODE-4127-length-7179-cov-5.008703|viral_sequence ERZ2641811.4127-NODE-4127-length-7179-cov-5.008703 viral_sequence — View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue