HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641809.243-NODE-243-length-118728-cov-155.807387|prophage-4604:94509 ERZ2641809.243-NODE-243-length-118728-cov-155.807387 prophage View contig
Cluster representative of 53 other viral fragments. View cluster
ERZ2641809.24793-NODE-24793-length-4508-cov-7.558500|viral_sequence ERZ2641809.24793-NODE-24793-length-4508-cov-7.558500 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641809.24871-NODE-24871-length-4494-cov-32.794098|viral_sequence ERZ2641809.24871-NODE-24871-length-4494-cov-32.794098 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641809.25228-NODE-25228-length-4444-cov-3.829802|viral_sequence ERZ2641809.25228-NODE-25228-length-4444-cov-3.829802 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641809.253-NODE-253-length-116255-cov-50.955783|prophage-22428:63084 ERZ2641809.253-NODE-253-length-116255-cov-50.955783 prophage View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641809.25472-NODE-25472-length-4405-cov-7.025517|viral_sequence ERZ2641809.25472-NODE-25472-length-4405-cov-7.025517 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641809.25851-NODE-25851-length-4350-cov-4.233062|viral_sequence ERZ2641809.25851-NODE-25851-length-4350-cov-4.233062 viral_sequence Guernseyvirinae View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641809.25894-NODE-25894-length-4343-cov-5.435401|viral_sequence ERZ2641809.25894-NODE-25894-length-4343-cov-5.435401 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641809.26107-NODE-26107-length-4313-cov-5.305777|viral_sequence ERZ2641809.26107-NODE-26107-length-4313-cov-5.305777 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641809.26397-NODE-26397-length-4275-cov-7.887441|viral_sequence ERZ2641809.26397-NODE-26397-length-4275-cov-7.887441 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue