HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641780.19682-NODE-19682-length-5050-cov-5.167568|viral_sequence ERZ2641780.19682-NODE-19682-length-5050-cov-5.167568 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641780.19778-NODE-19778-length-5029-cov-6.245074|viral_sequence ERZ2641780.19778-NODE-19778-length-5029-cov-6.245074 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641780.19804-NODE-19804-length-5022-cov-42.353936|viral_sequence ERZ2641780.19804-NODE-19804-length-5022-cov-42.353936 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641780.19960-NODE-19960-length-4989-cov-32.802392|viral_sequence ERZ2641780.19960-NODE-19960-length-4989-cov-32.802392 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641780.19962-NODE-19962-length-4989-cov-11.337049|viral_sequence ERZ2641780.19962-NODE-19962-length-4989-cov-11.337049 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641780.20-NODE-20-length-175267-cov-14.635282|prophage-8386:121835 ERZ2641780.20-NODE-20-length-175267-cov-14.635282 prophage View contig
Cluster representative of 95 other viral fragments. View cluster
ERZ2641780.20365-NODE-20365-length-4893-cov-4.982224|viral_sequence ERZ2641780.20365-NODE-20365-length-4893-cov-4.982224 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641780.20468-NODE-20468-length-4874-cov-44.065989|viral_sequence ERZ2641780.20468-NODE-20468-length-4874-cov-44.065989 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641780.20572-NODE-20572-length-4852-cov-7.508651|viral_sequence ERZ2641780.20572-NODE-20572-length-4852-cov-7.508651 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641780.20674-NODE-20674-length-4832-cov-37.304584|viral_sequence ERZ2641780.20674-NODE-20674-length-4832-cov-37.304584 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue