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Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

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Viral sequence ID Parent contig Type Taxonomy View
ERZ2641742.28-NODE-28-length-195605-cov-19.757683|prophage-108:68396 ERZ2641742.28-NODE-28-length-195605-cov-19.757683 prophage Viewing
Cluster representative of 23 other viral fragments. View cluster
ERZ2641742.2909-NODE-2909-length-16584-cov-12.652323|viral_sequence ERZ2641742.2909-NODE-2909-length-16584-cov-12.652323 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2641742.292-NODE-292-length-69141-cov-250.596213|prophage-23947:39191 ERZ2641742.292-NODE-292-length-69141-cov-250.596213 prophage View contig
Cluster representative of 39 other viral fragments. View cluster
ERZ2641742.293-NODE-293-length-69122-cov-34.586011|prophage-43663:69023 ERZ2641742.293-NODE-293-length-69122-cov-34.586011 prophage View contig
Cluster representative of 15 other viral fragments. View cluster
ERZ2641742.29437-NODE-29437-length-2519-cov-5.630276|viral_sequence ERZ2641742.29437-NODE-29437-length-2519-cov-5.630276 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641742.29698-NODE-29698-length-2503-cov-3.710376|viral_sequence ERZ2641742.29698-NODE-29698-length-2503-cov-3.710376 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641742.3131-NODE-3131-length-15673-cov-249.478871|viral_sequence ERZ2641742.3131-NODE-3131-length-15673-cov-249.478871 viral_sequence View contig
Cluster representative of 50 other viral fragments. View cluster
ERZ2641742.31633-NODE-31633-length-2386-cov-3.505363|viral_sequence ERZ2641742.31633-NODE-31633-length-2386-cov-3.505363 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641742.318-NODE-318-length-66801-cov-42.833233|viral_sequence ERZ2641742.318-NODE-318-length-66801-cov-42.833233 viral_sequence View contig
Cluster representative of 10 other viral fragments. View cluster
ERZ2641742.3226-NODE-3226-length-15340-cov-15.163754|viral_sequence ERZ2641742.3226-NODE-3226-length-15340-cov-15.163754 viral_sequence View contig
Cluster representative of 6 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue