HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641724.38966-NODE-38966-length-2036-cov-4.322060|viral_sequence ERZ2641724.38966-NODE-38966-length-2036-cov-4.322060 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641724.39748-NODE-39748-length-2005-cov-5.807179|viral_sequence ERZ2641724.39748-NODE-39748-length-2005-cov-5.807179 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.39969-NODE-39969-length-1997-cov-10.078270|viral_sequence ERZ2641724.39969-NODE-39969-length-1997-cov-10.078270 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.40386-NODE-40386-length-1982-cov-4.254281|viral_sequence ERZ2641724.40386-NODE-40386-length-1982-cov-4.254281 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.4059-NODE-4059-length-10884-cov-10.560347|viral_sequence ERZ2641724.4059-NODE-4059-length-10884-cov-10.560347 viral_sequence Viewing
Cluster representative of 7 other viral fragments. View cluster
ERZ2641724.4069-NODE-4069-length-10859-cov-18.167808|viral_sequence ERZ2641724.4069-NODE-4069-length-10859-cov-18.167808 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641724.4105-NODE-4105-length-10796-cov-12.044316|viral_sequence ERZ2641724.4105-NODE-4105-length-10796-cov-12.044316 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641724.434-NODE-434-length-47841-cov-17.889131|prophage-23380:47754 ERZ2641724.434-NODE-434-length-47841-cov-17.889131 prophage View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2641724.4379-NODE-4379-length-10265-cov-7.398825|viral_sequence ERZ2641724.4379-NODE-4379-length-10265-cov-7.398825 viral_sequence View contig
Cluster representative of 2 other viral fragments. View cluster
ERZ2641724.44-NODE-44-length-154214-cov-23.620587|prophage-623:54692 ERZ2641724.44-NODE-44-length-154214-cov-23.620587 prophage View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue