HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641724.17228-NODE-17228-length-3761-cov-3.863195|viral_sequence ERZ2641724.17228-NODE-17228-length-3761-cov-3.863195 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.17663-NODE-17663-length-3691-cov-5.423817|viral_sequence ERZ2641724.17663-NODE-17663-length-3691-cov-5.423817 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.17730-NODE-17730-length-3682-cov-8.391232|viral_sequence ERZ2641724.17730-NODE-17730-length-3682-cov-8.391232 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.1956-NODE-1956-length-18510-cov-19.141046|viral_sequence ERZ2641724.1956-NODE-1956-length-18510-cov-19.141046 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641724.19817-NODE-19817-length-3399-cov-4.266148|viral_sequence ERZ2641724.19817-NODE-19817-length-3399-cov-4.266148 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.20265-NODE-20265-length-3348-cov-4.214090|viral_sequence ERZ2641724.20265-NODE-20265-length-3348-cov-4.214090 viral_sequence Viewing
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.2111-NODE-2111-length-17457-cov-18.954316|viral_sequence ERZ2641724.2111-NODE-2111-length-17457-cov-18.954316 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.213-NODE-213-length-70730-cov-16.094729|prophage-54670:64340 ERZ2641724.213-NODE-213-length-70730-cov-16.094729 prophage View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641724.2131-NODE-2131-length-17371-cov-19.219508|viral_sequence ERZ2641724.2131-NODE-2131-length-17371-cov-19.219508 viral_sequence View contig
Cluster representative of 3 other viral fragments. View cluster
ERZ2641724.21517-NODE-21517-length-3205-cov-5.991746|viral_sequence ERZ2641724.21517-NODE-21517-length-3205-cov-5.991746 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue