HoloFood Data Portal

Access samples and data collected and generated by the HoloFood project.

Viral contig viewer

Filter viral fragments

 Clear all filters

Species-level cluster representatives always shown.

Chicken Gut v1.0 viral catalogue

 Download all as TSV Browse related MAG catalogue
Viral sequence ID Parent contig Type Taxonomy View
ERZ2641716.284-NODE-284-length-80309-cov-15.347260|prophage-117:33201 ERZ2641716.284-NODE-284-length-80309-cov-15.347260 prophage Viewing
Cluster representative of 7 other viral fragments. View cluster
ERZ2641716.28681-NODE-28681-length-2009-cov-4.703173|viral_sequence ERZ2641716.28681-NODE-28681-length-2009-cov-4.703173 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641716.2921-NODE-2921-length-19180-cov-40.500497|viral_sequence ERZ2641716.2921-NODE-2921-length-19180-cov-40.500497 viral_sequence View contig
Cluster representative of 1 other viral fragment. View cluster
ERZ2641716.29883-NODE-29883-length-1937-cov-3.982465|viral_sequence ERZ2641716.29883-NODE-29883-length-1937-cov-3.982465 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641716.30179-NODE-30179-length-1920-cov-4.964611|viral_sequence ERZ2641716.30179-NODE-30179-length-1920-cov-4.964611 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641716.3054-NODE-3054-length-18385-cov-22.434697|viral_sequence ERZ2641716.3054-NODE-3054-length-18385-cov-22.434697 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2641716.3086-NODE-3086-length-18129-cov-17.995574|viral_sequence ERZ2641716.3086-NODE-3086-length-18129-cov-17.995574 viral_sequence Arquatrovirinae View contig
Cluster representative of 4 other viral fragments. View cluster
ERZ2641716.3257-NODE-3257-length-17308-cov-7.994610|viral_sequence ERZ2641716.3257-NODE-3257-length-17308-cov-7.994610 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster
ERZ2641716.3273-NODE-3273-length-17255-cov-34.130465|viral_sequence ERZ2641716.3273-NODE-3273-length-17255-cov-34.130465 viral_sequence Nymbaxtervirinae View contig
Cluster representative of 3 other viral fragments. View cluster
ERZ2641716.33224-NODE-33224-length-1752-cov-4.411903|viral_sequence ERZ2641716.33224-NODE-33224-length-1752-cov-4.411903 viral_sequence View contig
Cluster representative of 0 other viral fragments. View cluster

Analysis summaries

Documents written by HoloFood partners and collaborators relevant to the Chicken Gut v1.0 Viral Catalogue